Basic Local Alignment Search Tool - BLAST
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.
BLAST ® Command Line Applications User Manual - National …
Jun 23, 2008 · This manual documents the BLAST (Basic Local Alignment Search Tool) command line applications developed at the National Center for Biotechnology Information (NCBI).
BLAST QuickStart - Comparative Genomics - NCBI Bookshelf
This BLAST Quickstart chapter illustrates the use of the principal BLAST programs to solve problems that arise in the analysis of protein and nucleotide sequences. Each section provides a succinct description of a protocol with two problems that serve as practical examples.
Standalone BLAST Setup for Windows PC - BLAST® Help - NCBI Bookshelf
May 31, 2010 · These utilities run through DOS-like command windows and accept input through text-based command line switches. There is no graphic user interface. The following tutorial discusses the steps needed to install BLAST + and a sample NCBI database on PCs running Windows 10 Operating System.
Feb 28, 2011 · Introduction: The Basic Local Alignment Search Tool (BLAST) is a program that can detect sequence similarity between a Query sequence and sequences within a database. The ability to detect sequence homology allows us to identify putative genes in a novel sequence.
Overview — BLASTHelp documentation
A RESTful interface is supported for submission of BLAST searches via an HTTP based interface. Searches are submitted to the NCBI servers. Documentation and sample perl code are available.
BLAST programs — BLASTHelp documentation
BLAST programs. Reviews, improvements and useful introductions. Sequence filtering. Alignment scoring systems. Alignment statistics. Programs that use blast. BLAST programs ¶ Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J. (1990) “Basic local alignment search tool.” J. Mol. Biol. 215:403-410. PubMed
BLAST Command Line Applications User Manual - Animal Genome
Feb 2, 2024 · This manual documents the BLAST (Basic Local Alignment Search Tool) command line applications developed at the National Center for Biotechnology Information (NCBI). These applications have been revamped to provide an improved user interface, new features, and performance improvements compared to its counterparts in the NCBI C Toolkit.
NCBI BLAST: a better web interface - PMC - PubMed Central …
Basic Local Alignment Search Tool (BLAST) is a sequence similarity search program. The public interface of BLAST, http://www.ncbi.nlm.nih.gov/blast, at the NCBI website has recently been reengineered to improve usability and performance. Key new features include simplified search forms, improved navigation, a list of recent BLAST results, saved ...
Alessandro201/BlastUI: Graphical Interface for BLAST - GitHub
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.
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